PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.N5DK2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 173aa    MW: 19805.7 Da    PI: 7.5821
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.N5DK2genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.22.1e-06134440
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC......TTS-STC CS
          HLH  4 ahnerErrRRdriNsafeeLrellPkas...kapskKlsK 40
                 +h e Er+RR+++ +  ++Lr+llP  +   +      +K
  Aradu.N5DK2  1 MHRETERQRRQEMGKLCATLRSLLPLEYiklQ------NK 34
                 599**********************9743442......33 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.017148IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.82E-6249IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.9E-4234IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MHRETERQRR QEMGKLCATL RSLLPLEYIK LQNKVKKLQA KRDELKKHFS DLNNNAIHDD  60
EDESILHLPP YVVVHPLQGV GVEIICSYSF KKCLCPLSRL LHILIGEGLN IINTISTKKN  120
GRFIHTIQSE DPNISSSADY SELQRKLTEA ISSSSSLPET LIRPEENINI SEY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015967285.15e-95PREDICTED: transcription factor bHLH120-like
TrEMBLA0A0S3TB412e-58A0A0S3TB41_PHAAN; Uncharacterized protein
STRINGGLYMA09G27610.12e-57(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79233125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.12e-24bHLH family protein